Vega G, Agudelo C, Graham ME, Do EA, Akter J, Haque R, Hernandez-Kaempf N, Iranpur KR, Renfro A, Hsiao A, Wolf AR, Patnode ML. (2026). Gut bacteria prime host antibody responses against ingested dietary fiber glycans. BioRxiv. DOI: 10.64898/2026.08.07.743361
Agudelo C, Balakhmet A, Berry SB, Fox DM, Stanley SA, Wolf AR. (2026). Host control of Mycobacterium tuberculosis infection is not influenced by the gut microbiome. BioRxiv. DOI: 10.64898/2026.08.05.743129
Cirolia GT, Gustafson JT, Aswani A, Wolf AR. (2026). Performance of IBD machine learning classifiers varies across microbiome training data independent of geographic diversity. BioRxiv. DOI: 10.64898/2026.05.21.727052
Agudelo C, Nsereko M, Ainebyona A, Andama A, Castro R, Mikhail Leung SR, Nakafeero J, Nannyonga G, Nolan K, Teran L, Wambi P, Young MG, Kato-Maeda M, Cattamanchi A, Jaganath D, Wobudeya E, Wolf AR. (2026). Evaluating metagenomic sequencing as a stool-based diagnostic in children with presumptive TB in Uganda. MedRxiv. DOI: 10.64898/2026.01.29.26345155.
Phandanouvong-Lozano V, Pastore L, Miller G, Lin KY, Wolf AR. (2026). A bidirectional nanAKE locus enables sialic acid catabolism in gut microbiome member Hungatella hathewayi. BioRxiv. DOI: 10.64898/2026.05.18.725967/.
Wolf AR. (2025). A. baumannii’s nutrient tug-of-war. Cell Host & Microbe, 33, 1313-1314.
Agudelo C*, Kateete DP*, Nasinghe E*, Kamulegeya R, Lubega C, Mbabazi M, Baker N, Lin KY, Liu CC, Kasambula AS, Kigozi E, Komakech K, Mukisa J, Mulumba K, Mwachan P, Nakalanda BS, Nalubega GP, Nsubuga J, Sitenda D, Ssenfuka H, Cirolia GT, Gustafson JT, Wang R, Nsubuga ML, Yiga F, Stanley SA, Bagaya BS, Elliott A, Joloba M*, Wolf AR*. Enterococcus and Eggerthella species are enriched in the gut microbiomes of COVID-19 cases in Uganda. Gut Pathog. 2025 Feb 4;17(1):9.
Wolf, A.R., Wesener, D.A., Cheng, J., Houston-Ludlam, A.N., Beller, Z.W., Hibberd, M.C., Giannone, R.J., Peters, S.L., Hettich, R.L., Leyn, S.A.,Rodionov, D.A., Osterman, A.L., and Gordon, J.I. (2019). Bioremediation of a Common Product of Food Processing by a Human Gut Bacterium. Cell Host & Microbe, 26, 463-477.e468.
Ma H., Sales, V.M., Wolf, A.R, Subramanian S., Matthews, T.J, Chen, M., Sharma, A., Gall, W., Kulik, W., Cohen, D.E., Adachi, Y., Griffin, N.W., Gordon, J.I., Patti, M.-E. and Isganaitis, E. (2017). Attenuated Effects of Bile Acids on Glucose Metabolism and Insulin Sensitivity in a Male Mouse Model of Prenatal Undernutrition. Endocrinology, 158(8), 2441–2452.
Wolf, A.R., and Mootha, V.K. (2014). Functional genomics of mitochondrial RNA processing. Cell Reports, 7, 918-931.
Caudy A.A., Guan Y., Jia Y., Hansen C., DeSevo C., Hayes A.P., Agee J., Alvarez-Dominguez J.R., Arellano H., Barrett D., Bauerle C., Bisaria N., Bradley P.H., Breunig J.S., Bush E., Cappel D., Capra E., Chen W., Clore J., Combs P.A., Doucette C., Demuren O., Fellowes P., Freeman S., Frenkel E., Gadala-Maria D., Gawande R., Glass D., Grossberg S., Gupta A., Hammonds-Odie L., Hoisos A., Hsi J., Hsu Y.H., Inukai S., Karczewski K.J., Ke X., Kojima M., Leachman S., Lieber D., Liebowitz A., Liu J., Liu Y., Martin T., Mena J., Mendoza R., Myhrvold C., Millian C., Pfau S., Raj S., Rich M., Rokicki J., Rounds W., Salazar M., Salesi M., Sharma R., Silverman S., Singer C., Sinha S., Staller M., Stern P., Tang H., Weeks S., Weidmann M., Wolf A., Young C., Yuan J., Crutchfield C., McClean M., Murphy C.T., Llinás M., Botstein D., Troyanskaya O.G., and Dunham M.J. (2013). A new system for comparative functional genomics of Saccharomyces yeasts. Genetics, 195, 275–287.
Broadbent, K.M., Park, D., Wolf, A.R., Van Tyne, D., Sims, J.S., Ribacke, U., Volkman, S., Duraisingh, M., Wirth, D., Sabeti, P.C., and Rinn, J.L. (2011). A global transcriptional analysis of Plasmodium falciparummalaria reveals a novel family of telomere-associated lncRNAs. Genome Biology12, R56.